BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021D02LP1|AL427747
(986 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1247 1890 0.0
3x_Contig195 1480 0.0
>3x_Contig1247
Length = 7218
Score = 1890 bits (953), Expect = 0.0
Identities = 973/979 (99%), Gaps = 1/979 (0%)
Strand = Plus / Minus
Query: 8 atacttatatataataaaacgcttccctctttataatctagagattttttaatttgccac 67
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 4556 atacttatatataataaatcgcttccctctttataatctagagatttcagaatttgccac 4497
Query: 68 cggatatgtgaaatttcggccgggtaacaatattttttcatctcctctctaagaagatcc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4496 cggatatgtgaaatttcggccgggtaacaatattttttcatctcctctctaagaagatcc 4437
Query: 128 ctcccacaatgcgaatgagctattggattccttatgtgaatggtaagtagaaattggtac 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4436 ctcccacaatgcgaatgagctattggattccttatgtgaatggtaagtagaaattggtac 4377
Query: 188 agtaggaaatatgtagttataatatatatgagacgatctcaatgatcatcttcgttagct 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4376 agtaggaaatatgtagttataatatatatgagacgatctcaatgatcatcttcgttagct 4317
Query: 248 tcgtcagcttcgtcagcttcgtcatcttcgtcatatcttggtctctttcattgcgaaaaa 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4316 tcgtcagcttcgtcagcttcgtcatcttcgtcatatcttggtctctttcattgcgaaaaa 4257
Query: 308 gatcgcgcttaggtttctagtttggcaagcaactttttatgcatttcactcagcttagca 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4256 gatcgcgcttaggtttctagtttggcaagcaactttttatgcatttcactcagcttagca 4197
Query: 368 aaatcagtttcctgtgcaggccaacctacgattaatccagcatcctttgttttctttggg 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4196 aaatcagtttcctgtgcaggccaacctacgattaatccagcatcctttgttttctttggg 4137
Query: 428 atcaaatggaaatgcacgtgatctacttcttgatgggctattctaccgttgttttgaagg 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4136 atcaaatggaaatgcacgtgatctacttcttgatgggctattctaccgttgttttgaagg 4077
Query: 488 acattgtaccctggaccatcaggaccatcttggtcgaagccaatggctttcactaacttc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4076 acattgtaccctggaccatcaggaccatcttggtcgaagccaatggctttcactaacttc 4017
Query: 548 ttagtaactggcaacaggtcagctaagtattcatctgggatgttgtgcaatttcccaccg 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4016 ttagtaactggcaacaggtcagctaagtattcatctgggatgttgtgcaatttcccaccg 3957
Query: 608 tggtgctttggaatgataagaatgtggttctcttcagttggttggatgtcaaggaacgag 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3956 tggtgctttggaatgataagaatgtggttctcttcagttggttggatgtcaaggaacgag 3897
Query: 668 taagaatactgagtttcaaccaatttgaaagaagggatttcacctgaaagtacaccagta 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3896 taagaatactgagtttcaaccaatttgaaagaagggatttcacctgaaagtacaccagta 3837
Query: 728 gtggaatctgttagtattatagttcataagatcaaagagctagtctaagccacttgggtg 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3836 gtggaatctgttagtattatagttcataagatcaaagagctagtctaagccacttgggtg 3777
Query: 788 gttgcgagcatgcaaaaaccaaggggagaaacagatatttgttctcacctaacaatttga 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3776 gttgcgagcatgcaaaaaccaaggggagaaacagatatttgttctcacctaacaatttga 3717
Query: 848 ggtttacatacctttgataatcttgcagaaaatacaagcagcgtcgtgggcaacagcact 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3716 ggtttacatacctttgataatcttgcagaaaatacaagcagcgtcgtgggcaacagcact 3657
Query: 908 cattggtatcggcttattaaacgtttgaattcacacgtatcggtacttattgcmatattt 967
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3656 cattggtatcggcttattaaacgtttgaattcacacgtatcggtacttattgcaatattt 3597
Query: 968 cttttcgactgcgaaaatg 986
| |||||||||||||||||
Sbjct: 3596 c-tttcgactgcgaaaatg 3579
>3x_Contig195
Length = 923
Score = 1480 bits (746), Expect = 0.0
Identities = 754/756 (99%), Gaps = 1/756 (0%)
Strand = Plus / Plus
Query: 231 gatcatcttcgttagcttcgtcagcttcgtcagcttcgtcatcttcgtcatatcttggtc 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatcatcttcgttagcttcgtcagcttcgtcagcttcgtcatcttcgtcatatcttggtc 60
Query: 291 tctttcattgcgaaaaagatcgcgcttaggtttctagtttggcaagcaactttttatgca 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctttcattgcgaaaaagatcgcgcttaggtttctagtttggcaagcaactttttatgca 120
Query: 351 tttcactcagcttagcaaaatcagtttcctgtgcaggccaacctacgattaatccagcat 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttcactcagcttagcaaaatcagtttcctgtgcaggccaacctacgattaatccagcat 180
Query: 411 cctttgttttctttgggatcaaatggaaatgcacgtgatctacttcttgatgggctattc 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctttgttttctttgggatcaaatggaaatgcacgtgatctacttcttgatgggctattc 240
Query: 471 taccgttgttttgaaggacattgtaccctggaccatcaggaccatcttggtcgaagccaa 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taccgttgttttgaaggacattgtaccctggaccatcaggaccatcttggtcgaagccaa 300
Query: 531 tggctttcactaacttcttagtaactggcaacaggtcagctaagtattcatctgggatgt 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggctttcactaacttcttagtaactggcaacaggtcagctaagtattcatctgggatgt 360
Query: 591 tgtgcaatttcccaccgtggtgctttggaatgataagaatgtggttctcttcagttggtt 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtgcaatttcccaccgtggtgctttggaatgataagaatgtggttctcttcagttggtt 420
Query: 651 ggatgtcaaggaacgagtaagaatactgagtttcaaccaatttgaaagaagggatttcac 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggatgtcaaggaacgagtaagaatactgagtttcaaccaatttgaaagaagggatttcac 480
Query: 711 ctgaaagtacaccagtagtggaatctgttagtattatagttcataagatcaaagagctag 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgaaagtacaccagtagtggaatctgttagtattatagttcataagatcaaagagctag 540
Query: 771 tctaagccacttgggtggttgcgagcatgcaaaaaccaaggggagaaacagatatttgtt 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctaagccacttgggtggttgcgagcatgcaaaaaccaaggggagaaacagatatttgtt 600
Query: 831 ctcacctaacaatttgaggtttacatacctttgataatcttgcagaaaatacaagcagcg 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctcacctaacaatttgaggtttacatacctttgataatcttgcagaaaatacaagcagcg 660
Query: 891 tcgtgggcaacagcactcattggtatcggcttattaaacgtttgaattcacacgtatcgg 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tcgtgggcaacagcactcattggtatcggcttattaaacgtttgaattcacacgtatcgg 720
Query: 951 tacttattgcmatatttcttttcgactgcgaaaatg 986
|||||||||| ||||||| |||||||||||||||||
Sbjct: 721 tacttattgcaatatttc-tttcgactgcgaaaatg 755
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7689
Number of Sequences: 1807
Number of extensions: 7689
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 2
length of query: 986
length of database: 10,358,551
effective HSP length: 16
effective length of query: 970
effective length of database: 10,329,639
effective search space: 10019749830
effective search space used: 10019749830
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)